Notes:
- It might be a good idea to print the autoPROC reference card (see moodle site). Otherwise there is a version here: autoproc_reference_card.pdf.
- The workshop machines should be fast enough to handle any data.
A good starting point might be to
- create a working directory for this tutorial, e.g.
mkdir ~/autoPROC
- go into that directory via
cd ~/autoPROC
process -I ~/Desktop/MyImages -d 01 | tee 01.lis
- this assumes that you copied your own images into ~/Desktop/MyImages
- that you haven't run autoSHARP before - otherwise increment the numbers (to 02, 03 etc)