• It might be a good idea to print the autoPROC reference card (see moodle site). Otherwise there is a version here: autoproc_reference_card.pdf.
  • The workshop machines should be fast enough to handle any data.

A good starting point might be to

  • create a working directory for this tutorial, e.g.
      mkdir ~/autoPROC
  • go into that directory via
      cd ~/autoPROC
  • start autoPROC via
      process -I ~/Desktop/MyImages -d 01 | tee 01.lis
    • this assumes that you copied your own images into ~/Desktop/MyImages
    • that you haven't run autoSHARP before - otherwise increment the numbers (to 02, 03 etc)