[sharp-discuss] problems in running autoSHARP

[Clemens Vonrhein]

Hi Huanwang,

since you get an error at this particular step I don't think it's a
problem with the licensing code (this would hit you already
earlier). I'm not quite sure what you mean by 'error without further
explainations': usually, autoSHARP should point you to a logfile with
(potentially) useful information.

Could you do the following:

  - go to the sharpfiles/logfiles/WHATEVER.INTEGER directory that was
    created for this test run. This directory should contain the main
    LISTautoSHARP.html file

  - have a look at the following files:

    LISTautoSHARP.html            (the main autoSHARP log file)
    SHARP_INIT/LISTautoSHARP.html (the autoSHARP logfile for this
                                   first SHARP run)
    LIST.html                     (the SHARP logfile)

  - also, do a

      % ls -ltra

    to see what the last written file(s) are.

You should also look into $BDG_home/sushi/logs/error_log - which might
contain any additional error messages coming from the SHARP server.

Some final thoughts: 

 - are you running any kind of 'unusual' automounter (that might make
   directories 'disappear' half way through the job)? 

 - did you use the supplied IF3-C.0 autoSHARP input file? Did you
   change anything in there?

 - which CCP4 version are you using? 4.1.1 is supported and 4.2
   _should_ work too (although I'm still in the progress to fix a few
   incompatibilities)

Hope that helps. If not: could you send us a few more information?

Cheers

Clemens

On Tue, Jun 25, 2002 at 04:36:56PM -0500, Huanwang Yang wrote:
> Hi,
> I got a problem when I was running autoSHARP by using the data IF3-C
> provided by the program.
> The output file stopped at the fourth step (4.2 Run first round of
> SHARP). It gave an error without
> further explainations. Could any body give me an anwser. Thank you very
> much.
> 
> Cheers,
> Huanwang.
> 
> --
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> *                Huanwang Yang  Ph.D.                      *
> * RCSB Protein Data Bank                                   *
> * Dep. of Chemistry & Chemical Biology, Rutgers University *
> * 610 Taylor Road, Piscataway, NJ 08854-8087               *
> * Phone: (732)-445-0103 (ext 226);  Fax: (732)-445-4320    *
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> 
> 

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