[sharp-discuss] Configuration problem with autoSHARP

[Clemens Vonrhein]

--qGV0fN9tzfkG3CxV
Content-Type: text/plain; charset=us-ascii
Content-Disposition: inline
Content-Transfer-Encoding: quoted-printable

Hi Morten,

this looks suspiciously like a forgotten MASTER configuration.

Remember, each machine that you want to run actual SHARP/autoSHARP
jobs on you you need to configure it as a MASTER. Even for the SERVER
(i.e. the machine you are running the httpd on). I guess you did run

  % ./installSHARP

(without any flag or with the -f flag)? In general, if you are
planning of installing SHARP/autoSHARP on a single machine (and submit
jobs interactively), I highly recommend the -F flag (see installation
instructions).

So what you need to do:

  % cd /where/ever/sharp
  % source ./setup.csh
  % adm/bin/newmachine <machine name>

  =3D=3D> where you have to give the machine name of the computer you want
      to run SHARP/autoSHARP jobs on, usually just the output of

        % hostname -s

      if you are only concerned about interactive submission.

Apart from that, make sure to apply the patch (see
http://www.globalphasing.com/sharp/news.html), as explained by Claus.


Cheers

Clemens



On Thu, Feb 12, 2004 at 01:27:53PM +0100, Morten Kjeldgaard wrote:
> Hi,
>=20
> When we attempt to run autoSHARP, we get the following errormessage:
>=20
> /u/sharp/bin/sharp/detect.sh: line 277: /autoSHARP/checks.sh: No such fil=
e=20
> or directory
>=20
> The file checks.sh _does_ exist, the path looks wrong, but BDG_home _is_
> correctly defined in /u/sharp/.bdgrc.  I suspect it is an error in the
> configuration, but what? I'd appreciate suggestions on how to solve this!
>=20
> Cheers,
> Morten
>=20
> --=20
> Morten Kjeldgaard=20
> Department of Molecular Biology, Aarhus University
> Gustav Wieds Vej 10 C, DK-8000 Aarhus C, Denmark
> Lab +45 89425026 * Mobile +45 89428063 * Fax +45 86123178
> Home +45 86188180 * ICQ 27224900 * http://imsb.au.dk/~mok
>=20
> _______________________________________________
> sharp-discuss mailing list
> sharp-discuss@globalphasing.com
> http://www.globalphasing.com/mailman/listinfo/sharp-discuss

--=20

***************************************************************
* Clemens Vonrhein, Ph.D.     vonrhein AT GlobalPhasing DOT com
*
*  Global Phasing Ltd.
*  Sheraton House, Castle Park=20
*  Cambridge CB3 0AX, UK
*--------------------------------------------------------------
* BUSTER Development Group      (http://www.globalphasing.com)
***************************************************************

--qGV0fN9tzfkG3CxV
Content-Type: application/pgp-signature
Content-Disposition: inline

-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.2.1 (GNU/Linux)

iD8DBQFAK3pD4f+nTPEF25QRAu9OAKCspJPxXYWPA1vMCwlDW8uXD8U/sQCcCKjq
wEYRRz5UgGwiJJ7QGFVpAnY=
=GWL6
-----END PGP SIGNATURE-----

--qGV0fN9tzfkG3CxV--