[sharp-discuss] FFT problem during solvent flattening

ttamada ttamada at neutrons.tokai.jaeri.go.jp
Wed Jun 29 03:25:06 BST 2005


Dear all,
 
I am trying to run a solvent flattening protocol through the Phase
Improvement Control Panel but I get the error message bellow. SOLOMON
(including FFT) and DM runs fine from a ccp4i (linux).
Any suggestions are appreciated!
 
Taro

 

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 ### CCP4 5.0: FFT                version 5.0       : 26/01/04##

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 User: sharp  Run date: 29/ 6/2005 Run time: 11:33:16 

 

 

 Please reference: Collaborative Computational Project, Number 4. 1994.

 "The CCP4 Suite: Programs for Protein Crystallography". Acta Cryst. D50,
760-763.

 as well as any specific reference in the program write-up.

 

 Data line--- LABI F1=Fcent PHI=PHIcent

 Data line--- RESO 38.341 3.50

 Data line--- XYZL ASU

 Map limits will be set to the CCP4 asymmetric unit

 Data line--- END

 

OPENED INPUT MTZ FILE 

Logical Name: HKLIN   Filename: eden-unique.mtz 

...

* Column Labels :

H K L NUMORB FB PHIB FOM HX HY FH PHIH FP SIGFP HLA HLB HLC HLD HL0 Fcent
PHIcent FOMcent Fmap PHImap FHref PHIHref FreeR_flag

...

Spacegroup information obtained from library file: 

Logical Name: SYMINFO   Filename: /home/sharp/database/syminfo.lib

...

Axis order in map: fast=Y,  medium= X,  slow(section)= Z

Permutation of axes: (program=input)  x= X,  y= Y,  z= Z

 

>>>>>> CCP4 library signal library_file:Cannot open file (Error)

         raised in ccp4_file_open <<<<<<

>>>>>> CCP4 library signal library_file:Null pointer passed (Error)

         raised in ccp4_file_mode <<<<<<

>>>>>> CCP4 library signal library_file:Null pointer passed (Error)

         raised in ccp4_file_writechar <<<<<<

>>>>>> CCP4 library signal library_file:Null pointer passed (Error)

         raised in ccp4_file_mode <<<<<<

 

--------------------------------------------------
Taro Tamada, Ph.D.
Senior Scientist
Structural Biology Group, Neutron Science Research Center,
Japan Atomic Energy Research Institute (JAERI)
Tokai-mura, Naka-gun, Ibaraki 319-1195, Japan
Phone.: +81-29-282-6736, Fax:+81-29-284-3822
E-mail: ttamada at neutrons.tokai.jaeri.go.jp
--------------------------------------------------

 

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