[sharp-discuss] installation error
Clemens Vonrhein
vonrhein at globalphasing.com
Tue Jan 15 20:31:47 GMT 2008
Hi Eugene,
each entry in LD_LIBRARY_PATH needs to exist - probably
/xtal/CCP4/ccp4-6.0.2/extralib
is the culprit? this is from CCP4 default setup - it adds a
non-existing directory ...
Cheers
Clemens
On Tue, Jan 15, 2008 at 08:28:40PM +0000, Eugene Valkov wrote:
> Hi Claus,
>
> This didn't work - error appears again (this time without the empty
> component "::")
>
> Any other thoughts? I'm sure this is something maddeningly simple - I
> just can't figure out what.
>
> Thanks,
>
> Eugene
>
> WARNING : invalid answer - try again.
>
> 4. list of directories for
> LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2/lib:/xtal/CCP4/ccp4-6.0.2/extralib]
> >
>
> Claus Flensburg wrote:
>
> >Hi Eugene,
> >
> >On Tue, Jan 15, 2008 at 07:42:38PM +0000, Eugene Valkov wrote:
> >...
> >
> >> 4. list of directories for
> >> LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> >> [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2
> >>/lib::/xtal/CCP4/ccp4-6.0.2/extralib] >
> >>
> >>
> >>WARNING : invalid answer - try again.
> >>
> >>/xtal/SHARP/adm/bin/dbtofile: line 284: warnnig: command not found
> >> 4. list of directories for
> >> LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> >> [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2
> >>/lib::/xtal/CCP4/ccp4-6.0.2/extralib] >
> >>
> >>
> >>The error message simply repeats regardless of input. As I enter Ctrl-C,
> >>the
> >>following message is displayed:
> >>
> >
> >
> >it appears the shell variable LD_LIBRARY_PATH has en empty component "::".
> >The install script tests for and requires that each component exists.
> >
> >Try this:
> >
> >env
> >LD_LIBRARY_PATH=/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2/lib:/xtal/CCP4/ccp4-6.0.2/extralib ./installSHARP -f
> >
> >Hope this helps.
> >
> >
> >Regards,
> >
> >ClAuS
> >
> >
>
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>
--
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* Clemens Vonrhein, Ph.D. vonrhein AT GlobalPhasing DOT com
*
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