[sharp-discuss] installation error

Clemens Vonrhein vonrhein at globalphasing.com
Tue Jan 15 20:31:47 GMT 2008


Hi Eugene,

each entry in LD_LIBRARY_PATH needs to exist - probably

  /xtal/CCP4/ccp4-6.0.2/extralib

is the culprit? this is from CCP4 default setup - it adds a
non-existing directory ... 

Cheers

Clemens

On Tue, Jan 15, 2008 at 08:28:40PM +0000, Eugene Valkov wrote:
> Hi Claus,
> 
> This didn't work - error appears again (this time without the empty 
> component "::")
> 
> Any other thoughts? I'm sure this is something maddeningly simple - I 
> just can't figure out what.
> 
> Thanks,
> 
> Eugene
> 
> WARNING : invalid answer - try again.
> 
> 4. list of directories for
> LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2/lib:/xtal/CCP4/ccp4-6.0.2/extralib] 
> >
> 
> Claus Flensburg wrote:
> 
> >Hi Eugene,
> >
> >On Tue, Jan 15, 2008 at 07:42:38PM +0000, Eugene Valkov wrote:
> >...
> >  
> >>  4. list of directories for
> >>     LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> >>     [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2
> >>/lib::/xtal/CCP4/ccp4-6.0.2/extralib] >
> >>
> >>
> >>WARNING : invalid answer - try again.
> >>
> >>/xtal/SHARP/adm/bin/dbtofile: line 284: warnnig: command not found
> >>  4. list of directories for
> >>     LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable :
> >>     [/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2
> >>/lib::/xtal/CCP4/ccp4-6.0.2/extralib] >
> >>
> >>
> >>The error message simply repeats regardless of input. As I enter Ctrl-C, 
> >>the
> >>following message is displayed:
> >>    
> >
> >
> >it appears the shell variable LD_LIBRARY_PATH has en empty component "::".
> >The install script tests for and requires that each component exists.
> >
> >Try this:
> >
> >env 
> >LD_LIBRARY_PATH=/xtal/XtalView/lib/ibmpcLinux2:/xtal/EMAN/lib:/xtal/CCP4/ccp4-6.0.2/lib:/xtal/CCP4/ccp4-6.0.2/extralib ./installSHARP -f
> >
> >Hope this helps.
> >
> >
> >Regards,
> >
> >ClAuS
> >
> >  
> 
> _______________________________________________
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> sharp-discuss at globalphasing.com
> https://www.globalphasing.com/mailman/listinfo/sharp-discuss
> 

-- 

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* Clemens Vonrhein, Ph.D.     vonrhein AT GlobalPhasing DOT com
*
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