[sharp-discuss] SHARP with two SAD isomorphous datasets
Jose Arcadio
jose.farias at tuebingen.mpg.de
Wed Jun 29 18:19:32 CEST 2011
Hello:
I have two derivatives soaked into the same platinum compound,
unfortunately the native is extremely non-isomorphous. The two platinum
soaks were scaled quite well because they are very isomorphous. I
already found the sites using shelx (doing SAD for both crystals
independently) also the hand is clear. I did this outside of the SHARP
pipeline. Just looking at the fractional coordinates of the sites they
seem to be different. I want to use SHARP to phase with both crystals,
but I am not sure whether the sites have the same origin.
My space group is C2221
soak 1
0.183571 0.783974 0.092060
0.355522 0.743103 0.105145
0.537300 0.722351 0.044651
soak 2
0.818542 0.218452 0.092027
0.644547 0.255127 0.108293
How likely is that both crystals have the same sites and how can I be
sure that the sites have the same origin? Is there a way in which I can
use autoSHARP in order to do two SAD experiments with no native? Maybe
submit a MAD experiment?
Thanks a lot for all your help
Jose Arcadio Farias Rico
PhD Student
Höcker Group (Protein Design)
http://www.eb.tuebingen.mpg.de/research-groups/birte-hocker/protein-design
MPI for Developmental Biology, Spemannstr. 35, 72076 Tübingen, Germany
Tel: +49 7071 601 365
Fax: +49 7071 601 305
E-Mail: jose.farias at tuebingen.mpg.de
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