[sharp-discuss] Trivial problem?
Luca Pellegrini
lp212 at cam.ac.uk
Tue Nov 22 17:01:44 CET 2011
Hello,
I am having an apparently trivial problem that I can't seem to figure out. I am trying to run Sharp in MAD mode, using peak (F_peak) and inflexion data (F_infl). When I start Sharp, it complains that it can't find Fs of the correct type F in my file:
ERROR
: No column "F_peak" of type "F" found in file
/usr/local/sharp-2.6/users/lp212/None.sharp/datafiles/npi-esrf14.4.data.mtz!
As far as I can tell, the mtz file looks ok. I report below the mtzdump of my mtz file. Can anyone please help?
Thanks,
Luca
***mtzdump***
OPENED INPUT MTZ FILE
Logical Name: HKLIN Filename: /usr/local/sharp-2.6/users/lp212/None.sharp/datafiles/npi-esrf14.4.data.mtz
Spacegroup information obtained from library file:
Logical Name: SYMINFO Filename: /sw/share/xtal/ccp4-6.2.0/lib/data/syminfo.lib
* Title:
npi esrf14.4 24october2011 Scala of ID29Oct11 H3 data
* Base dataset:
0 HKL_base
HKL_base
HKL_base
* Number of Datasets = 3
* Dataset ID, project/crystal/dataset names, cell dimensions, wavelength:
1 New
New
New
154.7187 154.7187 145.2614 90.0000 90.0000 120.0000
0.99188
2 SeHM10N52
C5_9
Peak
152.5392 152.5392 141.8202 90.0000 90.0000 120.0000
0.97920
3 SeHM10N52
C5_9renamed
Infl
152.5300 152.5300 141.9500 90.0000 90.0000 120.0000
0.97950
* Number of Columns = 17
* Number of Reflections = 23536
* Missing value set to NaN in input mtz file
* HISTORY for current MTZ file :
From FREERFLAG 6/10/2011 16:10:00 with fraction 0.050
data from CAD on 6/10/11
data from CAD on 18/11/11
* Column Labels :
H K L FreeR_flag F_nat SIGF_nat ISYM_nat F_peak SIGF_peak DANO_peak SIGDANO_peak ISYM_peak F_infl SIGF_infl DANO_infl SIGDANO_infl ISYM_infl
* Column Types :
H H H I F Q Y F Q D Q Y F Q D Q Y
* Associated datasets :
0 0 0 0 1 1 1 2 2 2 2 2 3 3 3 3 3
* Cell Dimensions : (obsolete - refer to dataset cell dimensions above)
154.7187 154.7187 145.2614 90.0000 90.0000 120.0000
* Resolution Range :
0.00010 0.10905 ( 98.489 - 3.028 A )
* Sort Order :
1 2 3 0 0
* Space group = 'H 3' (number 146)
(spacegroup is known)
Luca Pellegrini
Department of Biochemistry
University of Cambridge
80 Tennis Court Road
Cambridge CB2 1GA - UK
Email: lp212 at cam.ac.uk
Tel: 0044-1223-760469
Fax: 0044-1223-766002
Sanger building, room 3.59
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