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Hi all,<br>
I am running into several probably unrelated Sharp problems:<br>
<br>
a) Installation on a single user machine:<br>
- downloaded all the files in fresh directory<br>
- added new .licence file in this directory<br>
- added $BDG_home in .bashrc, sourced .bashrc<br>
- installSHARP -F in $BDG_home<br>
- .. useSHARP ...<br>
- the examples stop w/ the following error message: <br>
***SHARP-ERR-0002: Unknown return status = 6 ***<br>
<br>
Problems b) and c) occur on our main server on which Sharp itself seems
to run nicely:<br>
<br>
b) density modification including partial model:<br>
- after initial dm run fft quits with the following error message:<br>
<pre>Permutation of axes: (program=input) x= X, y= Y, z= Z
>>>>>> CCP4 library signal library_<a class="moz-txt-link-freetext" href="file:Cannot">file:Cannot</a> open file (Error)
raised in ccp4_file_open2 <<<<<<
>>>>>> CCP4 library signal mtz:Cannot open file (Error)
raised in MtzOpenForWrite <<<<<<
$TEXT:Warning: $$ comment $$
WARNING: LWOPEN_NOEXIT: failed to open output file FFTHKLSCR
$$
FFT: LWOPEN: failed to open output file
FFT: LWOPEN: failed to open output file</pre>
<br>
c) extracting phases from model:<br>
<h3>1. Generating structure factors from model model_26oLEGO.pdb</h3>
<a
href="http://kudu.bmsc.washington.edu:8080/users/jan/logfiles/periL-DAD-4Se-inv-HR.1/mkabcd_sfall.log">(details)</a><br>
<pre> scale and overall B-factor:
R-factor:
</pre>
<h3>2. Scaling of generated structure factors</h3>
<a
href="http://kudu.bmsc.washington.edu:8080/users/jan/logfiles/periL-DAD-4Se-inv-HR.1/mkabcd_rstats.log">(details)</a><br>
<pre> R-factor:
</pre>
<hr noshade="noshade">
<p><b>ERROR in /usr/local/sharp/sushi/cgi-bin/mkabcd.cgi</b>
</p>
<p> The following return values are set:
</p>
<ul>
<li>Child error = 256 </li>
<li>OS error = No such file or directory </li>
<li>Eval error = 0
</li>
</ul>
<p> <b>Error message : </b> <font color="#cc00ee">File "mkabcd.mtz1"
not found or not readable</font>
</p>
Any ideas?<br>
Thanks a lot<br>
Jan<br>
<br>
<pre class="moz-signature" cols="72">--
Jan Abendroth
Howard Hughes Medical Institute and
University of Washington
1959 NE Pacific Street, K-426
Box 357742
Seattle, WA-98195
phone: +1-206-616-4510
fax: +1-206-685-7002
</pre>
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