<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Clemens,<div class=""><br class=""></div><div class="">No, that still does not work, could it be that somehow BDG is not equated with SHARP?</div><div class=""><br class=""><div class="">
<div class="">Mark J van Raaij</div><div class=""><a href="mailto:mjvanraaij@cnb.csic.es" class="">mjvanraaij@cnb.csic.es</a></div><div class=""><a href="http://www.cnb.csic.es/~mjvanraaij" class="">http://www.cnb.csic.es/~mjvanraaij</a></div><div class=""><br class=""></div><div class=""><br class=""></div><br class="Apple-interchange-newline">
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<br class=""><div><blockquote type="cite" class=""><div class="">On 03 May 2015, at 03:35, Clemens Vonrhein <<a href="mailto:vonrhein@globalphasing.com" class="">vonrhein@globalphasing.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">Dear Mark,<br class=""><br class="">On Sat, May 02, 2015 at 07:19:47PM +0200, Mark J van Raaij wrote:<br class=""><blockquote type="cite" class="">I have installed CCP4i and that works properly, it is in /Applications. I also have the Shelx executables in /usr/bin, and they also work (just ran the ShelxCDE pipeline via CCP4i and that went ok, however I would like to see if Autoharp improves on it).<br class=""><br class="">I have made a .profile file containing:<br class="">source /Applications/ccp4-6.5/bin/ccp4.setup-sh<br class="">source /Users/mark/sharp-2.8/setup.sh<br class=""></blockquote><br class="">Correct.<br class=""><br class=""><blockquote type="cite" class="">Now, if I start CCP4i via the icon, Autosharp remains greyed out.<br class=""></blockquote><br class="">Yes - because that way of starting CCP4i (via Icon) will possibly not<br class="">pick up things in your ~/.profile. I don't know how CCP4i is being<br class="">started through that icon myself - maybe CCP4 can help so that you<br class="">know where you want to add that<br class=""><br class=""> . /Users/mark/sharp-2.8/setup.sh<br class=""><br class="">(or 'source') line.<br class=""><br class=""><blockquote type="cite" class="">However, if I start CCP4i from an XQuartz window, it is black, but something is still amiss.<br class="">When I click on it, it says:<br class="">"Can not get environment variable for BDG_home"<br class="">and the window does not get drawn.<br class=""></blockquote><br class="">It is looking for the value of SHARP_home that should point (in your<br class="">case) to /Users/mark/sharp-2.8:<br class=""><br class=""> export SHARP_home=/Users/mark/sharp-2.8<br class=""> ccp4i<br class=""><br class=""><blockquote type="cite" class="">Could someone help me fix this?<br class=""></blockquote><br class="">Does the above fix it for you?<br class=""><br class="">Please also note the info on<br class=""><br class=""> <a href="http://www.globalphasing.com/sharp/wiki/index.cgi?Ccp4Problems#ccp465" class="">http://www.globalphasing.com/sharp/wiki/index.cgi?Ccp4Problems#ccp465</a><br class=""><br class="">regarding autoSHARP in CCP4i.<br class=""><br class=""><blockquote type="cite" class="">If possible, could someone also tell me on how to make Autoharp appear not greyed out if I start CCP4i from the icon?<br class=""></blockquote><br class="">Maybe some Mac/Apple-expert can help there ... ?<br class=""><br class="">Cheers<br class=""><br class="">Clemens<br class=""><br class=""><blockquote type="cite" class=""><br class="">Many thanks in advance,<br class=""><br class="">Mark<br class=""><br class="">Mark J van Raaij<br class=""><a href="mailto:mjvanraaij@cnb.csic.es" class="">mjvanraaij@cnb.csic.es</a> <<a href="mailto:mjvanraaij@cnb.csic.es" class="">mailto:mjvanraaij@cnb.csic.es</a>><br class=""><a href="http://www.cnb.csic.es/~mjvanraaij" class="">http://www.cnb.csic.es/~mjvanraaij</a> <<a href="http://www.cnb.csic.es/~mjvanraaij" class="">http://www.cnb.csic.es/~mjvanraaij</a>><br class=""><br class=""><br class=""><br class=""><br class=""></blockquote><br class=""><blockquote type="cite" class="">_______________________________________________<br class="">sharp-discuss mailing list<br class=""><a href="mailto:sharp-discuss@globalphasing.com" class="">sharp-discuss@globalphasing.com</a><br class="">https://www.globalphasing.com/mailman/listinfo/sharp-discuss<br class=""></blockquote><br class=""><br class="">-- <br class=""><br class="">***************************************************************<br class="">* Clemens Vonrhein, Ph.D. vonrhein AT GlobalPhasing DOT com<br class="">*<br class="">* Global Phasing Ltd.<br class="">* Sheraton House, Castle Park <br class="">* Cambridge CB3 0AX, UK<br class="">*--------------------------------------------------------------<br class="">* BUSTER Development Group (<a href="http://www.globalphasing.com" class="">http://www.globalphasing.com</a>)<br class="">***************************************************************<br class=""></div></blockquote></div><br class=""></div></body></html>