.. grade2 documentation master file, created by
   sphinx-quickstart on Wed Jul 25 18:25:35 2018.

Grade2: Ligand Restraints
=========================

Grade2 is a ligand restraint dictionary generation tool for refinement and fitting.

.. toctree::
   :maxdepth: 1
   :caption: Contents:

   introduction
   Configuration & Testing <installation>
   usage
   examples
   Outputs <outputs>
   charging
   planes
   atom_naming
   CSD compatibility <csd_compatibility>
   grade_web_server
   difficult_groups
   Comparison to EH99 Restraints <comparison_to_eh99>
   ChangeLog <changelog>
   issues
   FAQs <faqs>

.. * :ref:`genindex`