[buster-discuss] Which Version of CCP4 does Buster Use?
Clemens Vonrhein
vonrhein at globalphasing.com
Thu Apr 19 09:25:39 BST 2007
Dear Aaron,
yes ... this is (still, embarassingly) correct.
Also: your MTZ files should be in CCP4 4.2.2 'format' (i.e. the
header). You could use the attached script for doing this:
A) converting into CCP4 4.2.2 format:
1. going into a clean environment (no CCP4 setup):
% /bin/tcsh -f
2. setting up CCP4 4.2.2
% source /where/ever/ccp4-4.2.2/include/ccp4.setup
3. 'converting' your post-(CCP4-4.2.2) MTZ file
% /where/ever/mtz2mtz.sh some.mtz some_422.mtz
B) converting from 4.2.2 format:
1. 'converting' your CCP4-4.2.2 MTZ file into the current CCP4
version:
% /where/ever/mtz2mtz.sh from_buster.mtz from_buster_current.mtz
All that script will do is to make sure the space-group name is given
correctly (as P212121 in CCP4-4.2.2 and as 'P 21 21 21' in newer CCP4
versions).
Cheers
Clemens
On Wed, Apr 18, 2007 at 07:21:08PM -0600, Aaron Greenwood wrote:
> In the list archive I found an email that seems to answer my question
> but I would like to verify it first.
>
> From the archive:
>
> >On Thu, Jan 19, 2006 at 03:02:26PM -0500, Katsuhiko Murakami wrote:
> >>/ I installed buster but I cannot use it since there is en error in
> >/>/ buster/buffet/cgi-bin/inputform.cgi. I attached html for more
> >detail.
> >/>/ Please suggest how to fix the error.
> >/
> >BUSTER 1.0.2 uses CCP4 4.2.2 - are you using that?
> >
> >If not you can use the ccp4_cv.sh script from Clemens:
> >
> >https://www.globalphasing.com/people/vonrhein/ccp4/index.html
> >
> >Regards,
> >
> >ClAuS
>
> USER'S ERROR message:
>
> >ERROR in /home/buster/buffet/cgi-bin/inputform.cgi
> >
> > The following return values are set:
> >
> > * Child error = 0
> > * OS error =
> > * Eval error = 0
> >
> >Error message : Error parsing the mtzdump output of
> >/home/buster/users/hli/None.buster/datafiles/Barnase.mtz
> >Cell/symmetry/resolution information is missing
>
> Is my problem the same as Katsuhiko Murakami's?
>
> Is it still the case that BUSTER uses only CCP4 4.2.2?
>
> Will downloading and running the ccp4_cv.sh script from Clemens solve
> the problem?
>
> Best regards,
>
> Aaron
>
> _______________________________________________
> buster-discuss mailing list
> buster-discuss at globalphasing.com
> https://www.globalphasing.com/mailman/listinfo/buster-discuss
>
--
***************************************************************
* Clemens Vonrhein, Ph.D. vonrhein AT GlobalPhasing DOT com
*
* Global Phasing Ltd.
* Sheraton House, Castle Park
* Cambridge CB3 0AX, UK
*--------------------------------------------------------------
* BUSTER Development Group (http://www.globalphasing.com)
***************************************************************
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