[buster-discuss] error running pipedream

Guenter Fritz guenter.fritz.phenix.ccp4 at gmail.com
Wed Feb 24 21:10:41 CET 2021


Dear Buster developers,

I was trying to run pipedream, but get the notice that reduce is not in 
the path, although it is.

Below is my input and the output.  Any hintwhat I am doing wrong is welcome.

System is Centos 8, CCP4 is 7.1, latest release of buster from today.

Many thanks and best regards,

Guenter

[guenter at epikur pipedream_test]$ pipedream -hklin paefs_215.mtz -hklref 
paefs_215.mtz -xyzin paefs_215.pdb -rhofit grade-XXX.cif -nthreads 6 -d 
paefs_215_results
.......

Command run: pipedream  -hklin paefs_215.mtz -hklref paefs_215.mtz 
-xyzin paefs_215.pdb -rhofit grade-XXX.cif -nthreads 6 -d paefs_215_results
For details see paefs_215_results/summary.out

ERROR: Unable to run hydrogenate - 'reduce' (in CCP4 distribution) not 
found on path!

[guenter at epikur pipedream_test]$ which reduce
/opt/software/CCP4/7.1/ccp4-7.1/bin/reduce


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