[sharp-discuss] Sushi on Linux box/SGI

Clemens Vonrhein vonrhein@globalphasing.com
Tue, 27 Aug 2002 11:18:21 +0100


Dear Klaus,

this is actually a new 'feature': if you're running SHARP in Expert
mode this boxes will become activated. The same kind of feature is
also implemented in the Phase Improvement and Interpretation Panel
(after you've run SHARP): some fields can't be edited.

I would always start with the suggestions given in this 'beginners'
mode. During phase improvement (density modification) you might want
to change a few things once you're sure you're on the right track and
have the right hand.

However, especially for the various non-isomorphism parameters I would
refrain from estimating these - at least with the current version of
SHARP (where this estimation is less than optimal). Future versions of
SHARP will have much more robust estimation routines. And you should
be carefull NOT to specify e.g. 

 - refinement/estimation of *_ISO parameters for the first dataset

 - refinement/estimation of *_ANO parameters if no DANO/SANO is
   present

and similar pitfalls.

Cheers

Clemens

On Fri, Aug 09, 2002 at 10:35:44AM +0100, K Futterer wrote:
> Hi,
> I'm using SHARP on a Linux PC, however in order to get the complete 
> input editor
> mask I'm running netscape on an SGI. Still, some of the estimate buttons 
> (for
> NISO_BGLO, NANO_BGLO, etc..) are inactivated (i.e. don't appear and cannot 
> be
> ticked). I got around this by editing the .sin file and then submitting from
> the GUI, however, I can't imagine this is the way it's supposed to work 
> (since
> it was different in earlier versions of SUSHI).
> 
> Klaus
> 
> -- 
> ______________________________________________________________________________
> 
> Klaus Futterer, Ph.D.
> School of Biosciences
> The University of Birmingham                 Tel: +44 - (0) 121 - 414 5895
> Edgbaston, Birmingham                    new Fax: +44 - (0) 121 - 414 5925
> U.K.  B15 2TT                                email: k.futterer@bham.ac.uk
> 
> ______________________________________________________________________________
> 
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