[sharp-discuss] - peak list from residual map

Tue, 12 Mar 2002 10:25:07 -0500

I got the following error messages when I tried to pick peaks on a residual 
map in autosharp. (sharp 3.0.2 &  ccp4 4.1.1 in redhat 7.2). The peak.log 
file was created in the tmp directory by CCP4, but it didnot display on the 
Sharp windows, this worked properly in sharp (2.0).

any suggestions

thanks 
venkataraman 

--------------------

!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML//EN//2.0"><html>
<head>
  <title>Peak list</title>
</head>
<body bgcolor="#FFFAFO" text="#00000O" alink="#FF0000" link="#0000C0" >
<CENTER><H1>Peak list</H1><H3>Compound 1 - Crystal 1 - Wavelength 1 - Batch 1 
- ANO</H3></CENTER>
<center><H3>User: <font color="#AA2244">vk</font>&nbsp;&nbsp;&nbsp; Project 
ID: <font color="#AA2244">new-mad.5</font></H3></center>
<HR NOSHADE>
Checking peaks against <A 
HREF="/users/vk/cardfiles/end_new-mad.5.sin">cardfiles/end_new-mad.5.sin</a><BR><P>
<PRE>
</FONT></PRE></TABLE></TABLE></UL></UL></OL></OL>
<P><HR NOSHADE><P><B>ERROR in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl</B>
<FONT COLOR="#CC00EE"><P>Undefined error: The following return values are set:
<UL>
  <LI>Child error = 2
  <LI>OS error = No such file or directory
  <LI>Eval error = 
</UL>
</FONT>
<P><HR NOSHADE><P>
<P>Last entries in the http daemon log file:<P>
<PRE>
[Fri Jan 25 11:13:47 2002] [notice] Apache/1.3.22 (Unix) configured -- 
resuming normal operations
[Fri Jan 25 11:13:47 2002] [notice] Accept mutex: sysvsem (Default: sysvsem)
[Fri Feb  1 14:48:57 2002] [notice] Apache/1.3.22 (Unix) configured -- 
resuming normal operations
[Fri Feb  1 14:48:57 2002] [notice] Accept mutex: sysvsem (Default: sysvsem)
Unable to determine CCP4 version from file /tmp/4672.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
Unable to determine CCP4 version from file /tmp/32495.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
[Tue Feb 26 18:36:27 2002] [notice] caught SIGTERM, shutting down
[Tue Feb 26 18:44:41 2002] [notice] Apache/1.3.22 (Unix) configured -- 
resuming normal operations
[Tue Feb 26 18:44:41 2002] [notice] Accept mutex: sysvsem (Default: sysvsem)
rm: cannot remove `new-mad.6': No such file or directory
mkdir: cannot create directory `new-mad.6': File exists
Unable to determine CCP4 version from file /tmp/4334.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
Unable to determine CCP4 version from file /tmp/5307.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
Unable to determine CCP4 version from file /tmp/5737.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
Unable to determine CCP4 version from file /tmp/6868.dir/peaks.log
(No such file or directory)
Undefined error in /usr/pgm/sharp3/sushi/cgi-bin/peak.pl
Error in script /usr/pgm/sharp3/sushi/cgi-bin/map.pl - No map selected for 
display! at /usr/pgm/sharp3/lib/libhtml.pl line 1415.
Unable to determine CCP4 version from file /tmp/6961.dir/peaks.log
(No such file or directory)
</PRE>
<PRE>