[sharp-discuss] problem running getax on SHARP

Clemens Vonrhein vonrhein at globalphasing.com
Mon Feb 27 12:18:56 GMT 2006


Dear Alejandro,

Ah yes - it seems like there is indeed a semicolon missing: line 303
should be

print "</td></tr>\n";

instead of

print "</td></tr>\n"


Please fix your file /usr/local/sharp/bin/sharp/getax.pl (it's already
fixed in my local version that will come out as the next release).

Cheers

Clemens

On Sat, Feb 25, 2006 at 01:02:49AM +0100, Alejandro Buschiazzo wrote:
> using  sharp 2.2.0  /  sushi 3.4.0
> 
> when launching getax to detect NCS I get the following errors
> 
> 1. The file
> 
> getax_49.0pc.log.2.html
> 
> is created in logfiles, but remains empty (as well as the dir getax_49.0pc)
> 
> 
> 2. The only message I get is in the STDERR file, which reads
> 
> 
> Scalar found where operator expected at 
> /usr/local/sharp/bin/sharp/getax.pl line 233, near "$section"
>         (Missing semicolon on previous line?)
> syntax error at /usr/local/sharp/bin/sharp/getax.pl line 233, near 
> "$section"
> Execution of /usr/local/sharp/bin/sharp/getax.pl aborted due to 
> compilation errors.
> 
> 
> Any help will be greatly appreciated!
> 
> 
> -- 
> Alejandro Buschiazzo
> Unite de Biochimie Structurale
> Institut Pasteur
> 25, rue du Dr. Roux
> 75724 PARIS CEDEX 15
> France
> Tel 33 1 40613984
> Fax 33 1 45688604
> 
> _______________________________________________
> sharp-discuss mailing list
> sharp-discuss at globalphasing.com
> http://www.globalphasing.com/mailman/listinfo/sharp-discuss
> 

-- 

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* Clemens Vonrhein, Ph.D.     vonrhein AT GlobalPhasing DOT com
*
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