[sharp-discuss] problem running getax on SHARP
Clemens Vonrhein
vonrhein at globalphasing.com
Mon Feb 27 12:18:56 GMT 2006
Dear Alejandro,
Ah yes - it seems like there is indeed a semicolon missing: line 303
should be
print "</td></tr>\n";
instead of
print "</td></tr>\n"
Please fix your file /usr/local/sharp/bin/sharp/getax.pl (it's already
fixed in my local version that will come out as the next release).
Cheers
Clemens
On Sat, Feb 25, 2006 at 01:02:49AM +0100, Alejandro Buschiazzo wrote:
> using sharp 2.2.0 / sushi 3.4.0
>
> when launching getax to detect NCS I get the following errors
>
> 1. The file
>
> getax_49.0pc.log.2.html
>
> is created in logfiles, but remains empty (as well as the dir getax_49.0pc)
>
>
> 2. The only message I get is in the STDERR file, which reads
>
>
> Scalar found where operator expected at
> /usr/local/sharp/bin/sharp/getax.pl line 233, near "$section"
> (Missing semicolon on previous line?)
> syntax error at /usr/local/sharp/bin/sharp/getax.pl line 233, near
> "$section"
> Execution of /usr/local/sharp/bin/sharp/getax.pl aborted due to
> compilation errors.
>
>
> Any help will be greatly appreciated!
>
>
> --
> Alejandro Buschiazzo
> Unite de Biochimie Structurale
> Institut Pasteur
> 25, rue du Dr. Roux
> 75724 PARIS CEDEX 15
> France
> Tel 33 1 40613984
> Fax 33 1 45688604
>
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>
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* Clemens Vonrhein, Ph.D. vonrhein AT GlobalPhasing DOT com
*
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