[sharp-discuss] SHarp on 64bit ubuntu?

Charlie Bond Charles.Bond at uwa.edu.au
Tue Nov 4 01:34:04 CET 2008


Hi Hari

Re ubuntu:
I had an issue with httpd in 6.04 x86_64 :

The distributed httpd core dumped, so I had to compile my own (as 
described in the docs), but the configure step for httpd failed. I 
tracked this down to the fact that 'sh' is alias to 'dash' on this 
distro. So if you run into this problem, changing that alias should make 
things work.

If you get errors 'blah: not found' when running 32 bit binaries, you 
may need to install libraries for 32bit backward compatibility 
(lib32stdc++6 I think, but I could be wrong...).

Cheers,
Charlie


Claus Flensburg wrote:
> Hi Hari,
> 
> On Mon, Nov 03, 2008 at 11:07:32AM -0500, hari jayaram wrote:
>> Hi I am writing in to query whether the sharp and sushi binaries work on a
>> 64bit machine.
>> I do see X86_64 listed on the compatible machine list , but I have not yet
>> tried to install it . I  am hoping to get an idea of whether I should try
>> and install sharp on our new Mac Pros running OSX Leopard and another linux
>> box running 64bit Ubuntu.
> 
> the SHARP/autoSHARP binaries for the linux platform (32bit)
> should run just fine on a 64bit box.
> 
> 
> Wrt. OSX Leopard: there are a couple of issues with installing the
> current distribution. 
> 
> Essentially you should do the following prior to running the installscript:
> 
> ========================================
> COMMAND_MODE=legacy /bin/sh
> 
> export COMMAND_MODE=legacy
> export _POSIX2_VERSION=200111
> 
> cd /where/files/are/downloaded
> #(source files to have CCP4; shelx[cd]; mapman; arp/wARP
> # in path)
> 
> sh ./installSHARP -F
> #...
> ========================================
> 
> and after installation add the two export lines above
> to the top of the file: $BDG_home/opsys/Darwin
> 
> 
> However, we expect to have full support for OSX Leopard running on MacIntel
> boxes in our next release (very soon, famous last words etc. ;-)
> 
> 
> With best wishes,
> 
> ClAuS
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> 
> .
> 

-- 
Charlie Bond
Professorial Fellow
University of Western Australia
School of Biomedical, Biomolecular and Chemical Sciences
M310
35 Stirling Highway
Crawley WA 6009
Australia
Charles.Bond at uwa.edu.au
+61 8 6488 4406



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