[sharp-discuss] mtz check fails during buster run

[Clemens Vonrhein]

Dear Eugene,

have a look at

  $BDG_home/machines/*/ccp4.setup

to see if maybe that needs updating (because it still refers to an
old/disappeared CCP4 installation)?

Cheers

Clemens

PS: buster-discuss might be an option? See:
https://www.globalphasing.com/mailman/listinfo/buster-discuss

On Tue, Aug 16, 2011 at 11:39:52AM +0100, Eugene Valkov wrote:
> Dear all,
> 
> I'm unable to run Buster as it keeps reporting the following error:
> 
> 
> ERROR : [mtzchk-0012] something wrong with the CCP4
>         functionality - see
>         /tmp/eugene-1313487225-mtzchk__20884.log
> 
> 
> and inspection of the log reveals this:
> 
> >>>>>> CCP4 library signal ccp4_general:Cannot open environ.def (Error)
>         raised in ccp4fyp <<<<<<
>  mtzdump:  Cannot open environ.def
>  mtzdump:  Cannot open environ.def
> 
> 
> .....
> 
> 
> # mtzdump binary:
> mtzdump is a tracked alias for /xtal/CCP4/ccp4-6.2.0/bin/mtzdump
> /xtal/CCP4/ccp4-6.2.0/bin/mtzdump
>        linux-gate.so.1 =>  (0xb7777000)
>        libm.so.6 => /lib/i386-linux-gnu/libm.so.6 (0xb773b000)
>        libc.so.6 => /lib/i386-linux-gnu/libc.so.6 (0xb75da000)
>        /lib/ld-linux.so.2 (0xb7778000)
> 
> 
> 
> I'm using Buster (version 1.6.0) and CCP4 (version 6.2) on Linux
> Ubuntu 11.04 32-bit. All the CCP4 programs work fine as far as I can
> tell, and I can use the data in REFMAC without any issues.
> 
> Any advice will be much appreciated!
> 
> 
> Regards,
> Eugene
> 
> 
> --
> Sanger Building
> Department of Biochemistry
> University of Cambridge
> 80 Tennis Court Road
> Cambridge CB2 1GA
> UK
> 
> -- 
> Eugene Valkov, D.Phil.
> Postdoctoral Research Fellow
> 
> Sanger Building
> Department of Biochemistry
> University of Cambridge
> 80 Tennis Court Road
> Cambridge CB2 1GA
> UK
> 
> email: ev269 at cam.ac.uk
> tel: +44 (0)1223 760 468
> fax: +44 (0)1223 766 002
> web: http://www-cryst.bioc.cam.ac.uk/groups/hyvonen
> _______________________________________________
> sharp-discuss mailing list
> sharp-discuss at globalphasing.com
> https://www.globalphasing.com/mailman/listinfo/sharp-discuss

-- 

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* Clemens Vonrhein, Ph.D.     vonrhein AT GlobalPhasing DOT com
*
*  Global Phasing Ltd.
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