[sharp-discuss] mtz check fails during buster run

[Miguel Ortiz Lombardía]

On 16/08/11 12:39, Eugene Valkov wrote:
> Dear all,
> 
> I'm unable to run Buster as it keeps reporting the following error:
> 
> 
> ERROR : [mtzchk-0012] something wrong with the CCP4
>         functionality - see
>         /tmp/eugene-1313487225-mtzchk__20884.log
> 
> 
> and inspection of the log reveals this:
> 
>>>>>>> CCP4 library signal ccp4_general:Cannot open environ.def (Error)
>         raised in ccp4fyp <<<<<<
>  mtzdump:  Cannot open environ.def
>  mtzdump:  Cannot open environ.def
> 
> 
> .....
> 
> 
> # mtzdump binary:
> mtzdump is a tracked alias for /xtal/CCP4/ccp4-6.2.0/bin/mtzdump
> /xtal/CCP4/ccp4-6.2.0/bin/mtzdump
>        linux-gate.so.1 =>  (0xb7777000)
>        libm.so.6 => /lib/i386-linux-gnu/libm.so.6 (0xb773b000)
>        libc.so.6 => /lib/i386-linux-gnu/libc.so.6 (0xb75da000)
>        /lib/ld-linux.so.2 (0xb7778000)
> 
> 
> 
> I'm using Buster (version 1.6.0) and CCP4 (version 6.2) on Linux
> Ubuntu 11.04 32-bit. All the CCP4 programs work fine as far as I can
> tell, and I can use the data in REFMAC without any issues.
> 
> Any advice will be much appreciated!
> 
> 
> Regards,
> Eugene
> 
> 
> --
> Sanger Building
> Department of Biochemistry
> University of Cambridge
> 80 Tennis Court Road
> Cambridge CB2 1GA
> UK
> 

Hi Eugene,

Have you upgraded ccp4 to 6.2 after having installed Buster?
If so, you need to rerun

ccp4_setup

HTH


-- 
Miguel

Architecture et Fonction des Macromolécules Biologiques (UMR6098)
CNRS, Universités d'Aix-Marseille I & II
Case 932, 163 Avenue de Luminy, 13288 Marseille cedex 9, France
Tel: +33(0) 491 82 55 93
Fax: +33(0) 491 26 67 20
mailto:miguel.ortiz-lombardia at afmb.univ-mrs.fr
http://www.afmb.univ-mrs.fr/Miguel-Ortiz-Lombardia