[sharp-discuss] ARP/wARP v7.3 auto_tracing.sh error?

Kip Guja kip at pharm.stonybrook.edu
Thu Oct 25 07:32:16 CEST 2012


Hi All,

I am getting an error during model building with ARP/wARP-7.3 and SHARP-2.8.  The relevant wARP_XX.Xpc.log.html file shows:

##################################

1. Running "auto_tracing.sh"

Wed Oct 24 23:33:07 EDT 2012

 Working directory    /home/sharp/data/test/sharpfiles/logfiles_local/if3-c.9/wARP_38.7pc
 Job ID is set to     20121024_233307
 X-ray data file      /home/sharp/sharp-2.8/users/test/None.sharp/logfiles/if3-c.9/eden_flat_38.7pc.mtz
 Sequence file        /home/sharp/sharp-2.8/users/test/None.sharp/logfiles/if3-c.9/wARP_38.7pc/seq_monomer.pir
 Tracing mode         WARPNTRACEPHASES

 Creating directory   /home/sharp/data/test/sharpfiles/logfiles_local/if3-c.9/wARP_38.7pc/20121024_233307

 Accepted label:      fp=FPsha
 Accepted label:      sigfp=SIGFPsha
 Accepted label:      fbest=FBshasol
 Accepted label:      phibest=PHIBshasol
 Accepted label:      freelabin=FreeR_flag
 mtz labels taken:    FPsha SIGFPsha FBshasol PHIBshasol FreeR_flag
if: Expression Syntax.

##################################
 
When I change to ARP/wARP-7.2 using $BDG_home/adm/bin/arpwarp_setup, everything runs perfectly.  I am probably making a silly mistake somewhere, but I can't seem to figure it out. 

Any and all advice would be much appreciated!

Best wishes,

Kip


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