[sharp-discuss] Unknown command for submission method "interactive"

[Clemens Vonrhein]

Hi Kevin,

something must have gone wrong during the installation: a link

  $BDG_home/sushi/submit -> ../submit

should exist anyway? Did you try to configure your own submission
system (only needed if you want anything else from interactive
submission, i.e. if you want to use a queuing system or such)? If you
haven't edited _anything_ in $BDG_home/submit then I would do:

  % cd /Users/jude/sharp
  % rm -fr sushi/submit
  % ln -s ../submit sushi/submit

to get back to the original state ...

Cheers

Clemens

On Wed, Aug 02, 2006 at 12:40:12PM -0400, Kevin Jude wrote:
> Clemens-
> I had the appropriate .sh links in /Users/jude/sharp/submit/interactive/ 
> but not in /Users/jude/sharp/sushi/submit/interactive.  After creating 
> the links, everything seems to work.  I'm not sure if I missed a step in 
> the setup or missed something in the instructions.
> 
> Thanks for your help,
> Kevin
> 
> 
> 
> Clemens Vonrhein wrote:
> >Dear Kevin,
> >
> >my first guess would be that something isn't right with the
> >permissions. 
> >
> >- did you install the software under the same account that
> >  you also run the httpd (SERVER) as?
> >
> >- in /Users/jude/sharp/sushi/submit/interactive: can the UNIX user
> >  running the httpd read/execute the *.sh files?
> >
> >- do you have anything interesting in
> >  /Users/jude/sharp/sushi/logs/error_log?
> >
> >- what does the following command say:
> >
> >  % cd /Users/jude/sharp
> >  % source ./setup.csh          # tcsh/csh
> >    - or -
> >  % . ./setup.sh                # sh/ksh/bash
> >  % adm/bin/checkBDG.sh
> >
> >Regarding LD_LIBRARY_PATH/DYLD_LIBRARY_PATH: the default value should
> >be whatever was set in your environment at the time of
> >installation. Depending how you install 3rd-party software (e.g. CCP4)
> >the LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable might need some values
> >- the installation/configuration tries to pick them up. However, if
> >you don't need any value for these to run anything on your machine,
> >you can indeed give it just any directory (e.g. /usr/lib, or
> >/usr/local/lib or /tmp or ...).
> >
> >Cheers
> >
> >Clemens
> >
> >On Wed, Aug 02, 2006 at 11:44:34AM -0400, Kevin Jude wrote:
> >>I've just installed SHARP on my desktop (OS X 10.4) and when trying to 
> >>run the tutorials I get this error:
> >>
> >>ERROR in /Users/jude/sharp/sushi/cgi-bin/autoSHARP.cgi
> >>
> >>    The following return values are set:
> >>
> >>    * Child error = 0
> >>    * OS error = No such file or directory
> >>
> >>Error message  :   Unknown command for submission method "interactive"
> >>
> >>
> >>This has been covered before on the mailing list 
> >>(http://www.globalphasing.com/pipermail/sharp-discuss/2004-December/001629.html) 
> >>but I went through the recommendations to no avail; the links in 
> >>$BDG_home/submit/interactive exist and are readable/executable.  Any 
> >>other ideas?
> >>
> >>While I'm posting...
> >>During the machine setup, I assumed that "list of directories for 
> >>LD_LIBRARY_PATH/DYLD_LIBRARY_PATH variable" is /usr/lib/.  Is that 
> >>correct?
> >>
> >>Thanks
> >>Kevin Jude
> >>
> >>_______________________________________________
> >>sharp-discuss mailing list
> >>sharp-discuss at globalphasing.com
> >>http://www.globalphasing.com/mailman/listinfo/sharp-discuss
> >>
> >
> 
> 
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> 

-- 

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