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AutoProcTutorials

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(You are AnonymousGnome)

Content:

  • Working with low-resolution datasets
  • Handling ice-rings
  • Analysing datasets for damaged (hot) pixels
  • Accommodating shutter synchronisation problems
  • Manually defining beamstop mask
  • Selecting subsets of data
  • Working with images from XDS MERGE2CBF program
  • Writing your own macros
  • Preparing an MTZ file for the STARANISO server
  • Running autoPROC at synchrotrons
  • Processing data from Dectris/Eiger detector (HDF5 format)
  • MRFANA (merging statistics) usage
  • Operational resolution
  • Looking at autoPROC results from SynchWeb (ISPyB) at Diamond Light source (DLS)

Tutorials using publically available data (work in progress):

  • Revisiting existing datasets (older PDB depositions etc)
  • SAD:
    • Se-MET: 5BXG 5BP7
    • Iodine: 4EYE
  • MAD:
    • Se-MET: 4E0E
  • SIRAS:
    • Hg: 4U4H
    • Ta6Br12 cluster: 4FHN (large complex at low resolution)

Tutorials for specific workshops and conferences:

  • ACA/Chicago 2010 workshop:
    • 1o22
    • 3isy
  • Lysozyme datasets:
    • Weakly bound Hepes molecule
  • Tutorials for the ACA/New Orleans 2011 session
    • Difficult high-resolution triclinic lysozyme
    • Weak anomalous 2qvo and 1y13
    • Challenging spots 3csl
  • ZCAM (Zaragoza) workshop (see workshop WWW page)
  • SLS/CH multi-axis goniostat workshop 2012
  • RapiData: 2024/SSRL 2023/SSRL 2022/SSRL 2018/SSRL, 2016/SSRL, 2015/SSRL, 2014/NSLS, 2013/NSLS, 2012/NSLS
  • ESRF 2013
  • Pasteur/CCP4 workshops Montevideo: 2021 2017 2015 2013
  • SEA COAST workshop: 2024 2020 2019
  • CCP4/Shanghai 2019 workshop

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